By Dudoit S., Speed T. P.
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Additional info for A score test for the linkage analysis of qualitative and quantitative traits based on identity [...]
Tomentosa Carrière P. × canescens (Aiton) Smith P. × brayshawii B. Boivin P. × acuminata Rydb. P. × hinckleyana Correll P. × jackii Sargent P. × canadensis Moench P. × smithii B. Boivin P. × generosa Henry P. 1 Allozymes and RFLP As a result of their (1) obligately outcrossing mating systems, (2) relatively large population sizes, and (3) extensive long-distance pollen and seed dispersal, species of the genus Populus have high levels of genetic variation for neutral molecular markers. Early studies based primarily on allozyme markers and Restriction Fragment Length Polymorphisms (RFLP) depicted several basic aspects of the population genetics of Populus species (Table 3).
Interestingly, nucleotide diversity in trees does not seem to be substantially higher than in other plants, including Arabidopsis thaliana, an annual characterized by high levels of self-fertilization. Presumably, this is because (1) longer generation cycles in trees translate into lower neutral substitution rates per year than in plants with shorter life cycles and (2) the genomes of many tree species, including those in the genus Populus, may still be affected by past demographic oscillations (Savolainen and Pyhäjärvi, 2007; Ingvarsson, 2008).
Upon heat stress. Ann Bot 98:361–377. Floate KD (2004) Extent and patterns of hybridization among the three species of Populus that constitute the riparian forest of southern Alberta, Canada. Can J Bot 82:253–264. Gilchrist EJ, Haughn GW, Ying CC et al. (2006) Use of Ecotilling as an efficient SNP discovery tool to survey genetic variation in wild populations of Populus trichocarpa. Mol Ecol 15: 1367–1378. Gom LA, Rood SB (1999) Patterns of clonal occurrence in a mature cottonwood grove along the Oldman River, Alberta.
A score test for the linkage analysis of qualitative and quantitative traits based on identity [...] by Dudoit S., Speed T. P.